Functional and biophysical characterization of a hyperthermostable GH51 α-L-arabinofuranosidase from Thermotoga petrophila

Biotechnol Lett. 2011 Jan;33(1):131-7. doi: 10.1007/s10529-010-0409-3. Epub 2010 Sep 25.

Abstract

A hyperthermostable glycoside hydrolase family 51 (GH51) α-L-arabinofuranosidase from Thermotoga petrophila RKU-1 (TpAraF) was cloned, overexpressed, purified and characterized. The recombinant enzyme had optimum activity at pH 6.0 and 70°C with linear α-1,5-linked arabinoheptaose as substrate. The substrate cleavage pattern monitored by capillary zone electrophoresis showed that TpAraF is a classical exo-acting enzyme producing arabinose as its end-product. Far-UV circular dichroism analysis displayed a typical spectrum of α/β barrel proteins analogously observed for other GH51 α-L-arabinofuranosidases. Moreover, TpAraF was crystallized in two crystalline forms, which can be used to determine its crystallographic structure.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Arabinose / metabolism
  • Bacteria / enzymology*
  • Circular Dichroism
  • Cloning, Molecular
  • Crystallization
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / genetics
  • Enzyme Stability
  • Gene Expression
  • Glycoside Hydrolases / chemistry
  • Glycoside Hydrolases / genetics*
  • Glycoside Hydrolases / isolation & purification
  • Glycoside Hydrolases / metabolism*
  • Hot Temperature
  • Hydrogen-Ion Concentration
  • Molecular Sequence Data
  • Protein Conformation
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / genetics
  • Recombinant Proteins / isolation & purification
  • Recombinant Proteins / metabolism
  • Sequence Analysis, DNA
  • Substrate Specificity

Substances

  • DNA, Bacterial
  • Recombinant Proteins
  • Arabinose
  • Glycoside Hydrolases
  • alpha-N-arabinofuranosidase

Associated data

  • GENBANK/ABQ46651