The Rice Kinase Phylogenomics Database: a guide for systematic analysis of the rice kinase super-family

Trends Plant Sci. 2010 Nov;15(11):595-9. doi: 10.1016/j.tplants.2010.08.004. Epub 2010 Sep 9.

Abstract

Determination of gene function is particularly problematic when studying large-gene families because redundancy limits the ability to assess the contributions of individual genes experimentally. Phylogenomics is a phylogenetic approach used in comparative genomics to predict the biological functions of members of large gene-families by assessing the similarity among gene products. In this report, we describe the application of the Rice Kinase Database for elucidating functions of individual members of this gene family.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Databases, Genetic*
  • Genome, Plant
  • Genomics
  • Oryza / enzymology*
  • Oryza / genetics*
  • Oryza / metabolism
  • Phosphotransferases / genetics

Substances

  • Phosphotransferases