Partial sequence analysis of the L1 gene of bovine papillomavirus type 1 detected by PCR with MY09/MY11 primers in equine sarcoids in Poland

Pol J Vet Sci. 2010;13(2):241-6.

Abstract

BPV-1 is now recognized as a main etiological agent of equine sarcoids. The etiopathogenesis of the equine sarcoids is equivocal and is not yet fully understood. The aim of the present study was to analyse a partial sequence of the L1 gene of BPV associated with equine sarcoids in Polish horses. After clinical diagnosis, 40 skin lesions obtained from 29 horses were collected. The amplicons of a fragment of BPV L1 DNA were detected using PCR with MY09/MY11 primers in 31 specimens. All of them were recognized as BPV-1. Phylogenetic analysis has allowed the amplicons of partial L1 gene to be divided into 3 phylogenetic groups (A, B, C) and one separate isolate (20c). Sequence variants from phylogenetic groups B, C and isolate 20c represented new genetic variants of BPV-1 L1. Sequence variants from groups B and C were submitted to GenBank NCBI.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Base Sequence
  • Bovine papillomavirus 1 / genetics
  • Bovine papillomavirus 1 / isolation & purification*
  • Capsid Proteins / chemistry
  • Capsid Proteins / genetics
  • Capsid Proteins / isolation & purification*
  • Horse Diseases / epidemiology
  • Horse Diseases / virology*
  • Horses
  • Molecular Sequence Data
  • Phylogeny
  • Poland / epidemiology
  • Polymerase Chain Reaction / veterinary*
  • Sarcoidosis / epidemiology
  • Sarcoidosis / veterinary*
  • Sarcoidosis / virology

Substances

  • Capsid Proteins
  • L1 protein, Bovine papillomavirus

Associated data

  • GENBANK/ACU24783
  • GENBANK/ACU24784
  • GENBANK/GQ451823
  • GENBANK/GQ451824