Near full-length sequence of HIV type 1 subtype J strain 04CMU11421 from Cameroon

AIDS Res Hum Retroviruses. 2010 Jun;26(6):693-7. doi: 10.1089/aid.2009.0305.

Abstract

Although Cameroon, in west central Africa, has a relatively low HIV prevalence of 5-6%, all HIV-1 groups (M, N, O, and P), nearly all HIV-1 group M subtypes, and numerous intersubtype recombinant forms have been identified in Cameroon. In this report, we describe the near full-length sequence of 04CMU11421, an HIV-1 group M subtype J strain collected in Cameroon in 2004. Phylogenetic analysis of the genome sequence shows high bootstrap support with three subtype J reference sequences in the HIV Sequence database. Therefore, 04CMU11421 represents a fourth pure subtype J isolate and the first reported in Cameroon.

MeSH terms

  • Cameroon
  • Cluster Analysis
  • Genotype
  • HIV Infections / virology*
  • HIV-1 / classification*
  • HIV-1 / genetics*
  • HIV-1 / isolation & purification
  • Humans
  • Molecular Sequence Data
  • Phylogeny
  • RNA, Viral / genetics*
  • Sequence Analysis, DNA
  • Sequence Homology

Substances

  • RNA, Viral

Associated data

  • GENBANK/GU237072