The tripartite capsid gene of Salmonella phage Gifsy-2 yields a capsid assembly pathway engaging features from HK97 and lambda

Virology. 2010 Jul 5;402(2):355-65. doi: 10.1016/j.virol.2010.03.041. Epub 2010 Apr 28.

Abstract

Phage Gifsy-2, a lambdoid phage infecting Salmonella, has an unusually large composite gene coding for its major capsid protein (mcp) at the C-terminal end, a ClpP-like protease at the N-terminus, and a approximately 200 residue central domain of unknown function but which may have a scaffolding role. This combination of functions on a single coding region is more extensive than those observed in other phages such as HK97 (scaffold-capsid fusion) and lambda (protease-scaffold fusion). To study the structural phenotype of the unique Gifsy-2 capsid gene, we have purified Gifsy-2 particles and visualized capsids and procapsids by cryoelectron microscopy, determining structures to resolutions up to 12A. The capsids have lambdoid T=7 geometry and are well modeled with the atomic structures of HK97 mcp and phage lambda gpD decoration protein. Thus, the unique Gifsy-2 capsid protein gene yields a capsid maturation pathway engaging features from both phages HK97 and lambda.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Capsid / metabolism*
  • Capsid / ultrastructure*
  • Capsid Proteins / genetics
  • Capsid Proteins / metabolism*
  • Cryoelectron Microscopy
  • Genes, Viral
  • Salmonella Phages / genetics
  • Salmonella Phages / physiology*
  • Salmonella Phages / ultrastructure*
  • Virus Assembly*

Substances

  • Capsid Proteins