Denoising of arterial spin labeling data: wavelet-domain filtering compared with Gaussian smoothing

MAGMA. 2010 Jun;23(3):125-37. doi: 10.1007/s10334-010-0209-8. Epub 2010 Apr 28.

Abstract

Purpose: To investigate a wavelet-based filtering scheme for denoising of arterial spin labeling (ASL) data, potentially enabling reduction of the required number of averages and the acquisition time.

Methods: ASL magnetic resonance imaging (MRI) provides quantitative perfusion maps by using arterial water as an endogenous tracer. The signal difference between a labeled image, where inflowing arterial spins are inverted, and a control image is proportional to blood perfusion. ASL perfusion maps suffer from low SNR, and the experiment must be repeated a number of times (typically more than 40) to achieve adequate image quality. In this study, systematic errors introduced by the proposed wavelet-domain filtering approach were investigated in simulated and experimental image datasets and compared with conventional Gaussian smoothing.

Results: Application of the proposed method enabled a reduction of the number of averages and the acquisition time by at least 50% with retained standard deviation, but with effects on absolute CBF values close to borders and edges.

Conclusions: When the ASL perfusion maps showed moderate-to-high SNRs, wavelet-domain filtering was superior to Gaussian smoothing in the vicinity of borders between gray and white matter, while Gaussian smoothing was a better choice for larger homogeneous areas, irrespective of SNR.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cerebral Arteries / physiology*
  • Cerebrovascular Circulation / physiology
  • Humans
  • Magnetic Resonance Imaging / methods*
  • Microcirculation / physiology
  • Models, Biological
  • Models, Statistical
  • Normal Distribution
  • Perfusion Imaging / methods*
  • Spin Labels*

Substances

  • Spin Labels