Ornithinibacter aureus gen. nov., sp. nov., a novel member of the family Intrasporangiaceae

Int J Syst Evol Microbiol. 2011 Mar;61(Pt 3):659-664. doi: 10.1099/ijs.0.022806-0. Epub 2010 Apr 16.

Abstract

A novel strain of the class Actinobacteria was isolated from a seawater sample collected in the South China Sea using modified R2A agar plates. The strain was a Gram-stain-positive, nonmotile, non-spore-forming, catalase-positive, irregular rod-shaped bacterium. The strain grew at 4-45 °C and pH 5.0-10.2, and tolerated 5% (w/v) NaCl. Based on its 16S rRNA gene sequence, the organism was related phylogenetically to members of the genera Fodinibacter (96.7% similarity), Lapillicoccus (96.5 %), Knoellia (95.0-95.8 %), Oryzihumus (95.6 %) and Humibacillus (95.6 %). The cell-wall contained L-ornithine as the major diagnostic diamino acid in the peptidoglycan. MK-8(H₄) was the predominant menaquinone. Major cellular fatty acids were iso-C₁₈:₁ω9c, iso-C₁₆:₀, iso-C₁₅:₀ and C₁₇:₀. The G+C content of the DNA was 69.6 mol%. Phenotypic and phylogenetic data revealed that this strain represents a novel species in a new genus of the family Intrasporangiaceae, for which the name Ornithinibacter aureus gen. nov., sp. nov. is proposed; the type strain of Ornithinibacter aureus is HB09001(T) (=CGMCC 1.10341(T) =DSM 23364(T)).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Actinobacteria / classification*
  • Actinobacteria / genetics
  • Actinobacteria / isolation & purification*
  • Actinobacteria / physiology
  • Bacterial Typing Techniques
  • Base Composition
  • China
  • Cluster Analysis
  • Culture Media / chemistry
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / genetics
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / genetics
  • Fatty Acids / analysis
  • Molecular Sequence Data
  • Ornithine / analysis
  • Phylogeny
  • RNA, Ribosomal, 16S / genetics
  • Seawater / microbiology*
  • Sequence Analysis, DNA
  • Vitamin K 2 / analysis

Substances

  • Culture Media
  • DNA, Bacterial
  • DNA, Ribosomal
  • Fatty Acids
  • RNA, Ribosomal, 16S
  • Vitamin K 2
  • Ornithine

Associated data

  • GENBANK/FJ796074