Prediction of protein crystallization outcome using a hybrid method

J Struct Biol. 2010 Jul;171(1):64-73. doi: 10.1016/j.jsb.2010.03.016. Epub 2010 Mar 27.

Abstract

The great power of protein crystallography to reveal biological structure is often limited by the tremendous effort required to produce suitable crystals. A hybrid crystal growth predictive model is presented that combines both experimental and sequence-derived data from target proteins, including novel variables derived from physico-chemical characterization such as R(30), the ratio between a protein's DSF intensity at 30°C and at T(m). This hybrid model is shown to be more powerful than sequence-based prediction alone - and more likely to be useful for prioritizing and directing the efforts of structural genomics and individual structural biology laboratories.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Crystallization
  • Crystallography, X-Ray
  • Data Interpretation, Statistical
  • Models, Molecular*
  • Proteins / chemistry*
  • Sequence Analysis, Protein

Substances

  • Proteins