MGFp: an open Mascot Generic Format parser library implementation

J Proteome Res. 2010 May 7;9(5):2762-3. doi: 10.1021/pr100118f.

Abstract

Despite the efforts of the mass spectrometry (MS) community to migrate data representation toward modern file formats, legacy text formats still play an important role in MS data processing workflows. We provide a formal grammar and a portable, efficient C++ implementation for a Mascot Generic Format (MGF) parser. Software and technical documentation are available from http://software.steenlab.org/mgfp/.

MeSH terms

  • Computational Biology / methods*
  • Database Management Systems
  • Databases, Factual*
  • Mass Spectrometry / methods*
  • Programming Languages*
  • Terminology as Topic