Chemical synthesis of 2'-O-alkylated siRNAs

Methods Mol Biol. 2010:623:155-70. doi: 10.1007/978-1-60761-588-0_10.

Abstract

Chemical synthesis has been a major endeavor to create active siRNAs. The downregulation of mRNA by 21-mer double-stranded siRNAs can be improved by using modified nucleotides, especially 2'-O-alkylated ones. Besides the commercially available 2 cent-O-methyl ribosides, 2'-alkyl groups bearing positive charges are especially promising candidates. We have shown that in a proper formulation they are superior to unmodified siRNAs. This may be due to enhanced stability and most probably to a better uptake into the cells.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alkylation
  • Chromatography, High Pressure Liquid
  • Down-Regulation
  • Mass Spectrometry
  • Organophosphorus Compounds / chemistry
  • RNA, Messenger / genetics
  • RNA, Small Interfering / chemical synthesis
  • RNA, Small Interfering / chemistry*
  • RNA, Small Interfering / metabolism*

Substances

  • Organophosphorus Compounds
  • RNA, Messenger
  • RNA, Small Interfering
  • phosphoramidite