De novo sequencing of two new cyclic theta-defensins from baboon (Papio hamadryas) leukocytes by matrix-assisted laser desorption/ionization mass spectrometry

Rapid Commun Mass Spectrom. 2010 Mar 15;24(5):599-604. doi: 10.1002/rcm.4424.

Abstract

Two cyclic theta-defensin peptides were isolated from leukocytes of the hamadryas baboon, Papio hamadryas, and purified to homogeneity by gel electrophoresis and reversed-phase high-performance liquid chromatography. Both peptides had high in vitro activity against Escherichia coli, Listeria monocytogenes, methicillin-resistant Staphylococcus aureus (MRSA) and Candida albicans. Here, we report their de novo sequencing by matrix-assisted laser desorption/ionization tandem time-of-flight mass spectrometry (MALDI-TOF/TOF-MS). This was accomplished by combining conventional enzymatic digestion with N-terminal derivatization by 2-sulfobenzoic acid cyclic anhydride (SACA) or 4-sulfophenylisothiocyanate (SPITC) to facilitate the interpretation of fragment ion spectra. In addition to the two cyclic theta-defensins (PhTDs) we also sequenced a novel Papio hamadryas alpha-defensin, PhD-4, which showed high sequence homology to rhesus alpha-defensin RMAD-1 and human alpha-defensin HNP-1.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Bacteria / drug effects
  • Benzenesulfonates / chemistry
  • Benzoates / chemistry
  • Candida albicans / drug effects
  • Computer Simulation
  • Defensins / chemistry*
  • Defensins / genetics
  • Defensins / metabolism
  • Defensins / pharmacology
  • Isothiocyanates / chemistry
  • Leukocytes / chemistry*
  • Microbial Sensitivity Tests
  • Papio hamadryas / blood*
  • Papio hamadryas / genetics
  • Peptide Fragments / chemistry
  • Peptide Fragments / genetics
  • Peptide Fragments / metabolism
  • Peptide Mapping
  • Sequence Homology, Amino Acid
  • Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization / methods*
  • alpha-Defensins / chemistry
  • alpha-Defensins / genetics

Substances

  • Benzenesulfonates
  • Benzoates
  • Defensins
  • Isothiocyanates
  • Peptide Fragments
  • alpha-Defensins
  • theta-defensin
  • 4-isothiocyanatobenzenesulfonate
  • 2-sulfobenzoic acid cyclic anhydride