A new DNA combing method for biochemical analysis

Anal Biochem. 2010 May 1;400(1):145-7. doi: 10.1016/j.ab.2010.01.021. Epub 2010 Jan 18.

Abstract

A simple molecular combing method for analysis of biochemical reactions, called the moving droplet method, has been developed. In this method, small droplets containing DNA molecules run down a sloped glass substrate, and this creates a moving interface among the air, droplet, and substrate that stretches the DNA molecules. This method requires a much smaller volume of sample solution than other established combing methods, allowing wider application in various fields. Using this method, lambdaDNA molecules were stretched and absorbed to a glass substrate, and single-molecule analysis of DNA synthesis by DNA polymerases was performed.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Carbocyanines / chemistry
  • DNA, Viral / biosynthesis*
  • DNA-Directed DNA Polymerase / metabolism
  • Fluorescent Dyes / chemistry
  • Glass
  • Rats

Substances

  • Carbocyanines
  • DNA, Viral
  • Fluorescent Dyes
  • cyanine dye 3
  • DNA-Directed DNA Polymerase