Comparison of clastogen-induced gene expression profiles in wild-type and DNA repair-deficient Rad54/Rad54B cells

BMC Genomics. 2010 Jan 12:11:24. doi: 10.1186/1471-2164-11-24.

Abstract

Background: Previously we found that Rad54/Rad54B cells are more sensitive towards mitomycin C (MMC) as compared to wild-type (WT) cells. This difference in sensitivity was absent upon exposure to other clastogens like bleomycin (BLM) and gamma-radiation. In order to get further insight into possible underlying mechanisms, gene expression changes in WT and Rad54/Rad54B MEFs (mouse embryonic fibroblasts) after exposure to the clastogens MMC and BLM were investigated. Exposures of these cells to mutagens (N-ac-AAF and ENU) and vehicle were taken as controls.

Results: Most exposures resulted in an induction of DNA damage signaling and apoptosis genes and a reduced expression of cell division genes in cells of both genotypes. As expected, responses to N-ac-AAF were very similar in both genotypes. ENU exposure did not lead to significant gene expression changes in cells of both genotypes, presumably due to its short half-life. Gene expression responses to clastogens, however, showed a genotype-dependent effect for BLM and MMC. MMC treated Rad54/Rad54B MEFs showed no induction of p53-signaling, DNA damage response and apoptosis as seen for all the other treatments.

Conclusion: These data support our finding that different types of clastogens exist and that responses to these types depend on the DNA repair status of the cells.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acetoxyacetylaminofluorene / pharmacology
  • Animals
  • Apoptosis
  • Bleomycin / pharmacology*
  • Cell Line
  • DNA Damage
  • DNA Repair*
  • Ethylnitrosourea / pharmacology
  • Gene Expression Profiling*
  • Genotype
  • Mice
  • Mitomycin / pharmacology*
  • Mutagens / pharmacology*
  • Oligonucleotide Array Sequence Analysis
  • Principal Component Analysis

Substances

  • Mutagens
  • Bleomycin
  • Mitomycin
  • Acetoxyacetylaminofluorene
  • Ethylnitrosourea