Minimal influence of water and nutrient content on the bacterial community composition of a maritime Antarctic soil

Microbiol Res. 2010 Sep 20;165(7):523-30. doi: 10.1016/j.micres.2009.11.005. Epub 2009 Dec 16.

Abstract

Bacterial community composition was determined by culture-independent PCR-based methods in two soils differing markedly in their water, C, N and P contents sampled from Mars Oasis on Alexander Island, western Antarctic Peninsula. 16S rRNA sequences of the phyla Actinobacteria, Cyanobacteria, α-Proteobacteria and Acidobacteria were commonly (> 8% frequency) obtained from soil. Those of β-, γ- and δ-Proteobacteria, Chloroflexi, Bacteroidetes, Verrucomicrobia, Planctomycetes, Gemmatimonadetes and Firmicutes were less frequent. Comparisons of slopes of collector's curves and the Shannon-Weiner diversity index indicated no difference in overall bacterial diversity between the two soils, although sequences of δ-Proteobacteria and the cyanobacterial genus Leptolyngbya were more commonly derived from the soil with the higher water and nutrient content. The data suggest that different levels of soil water, C, N and P have only a minor effect on the bacterial community composition of maritime Antarctic soils.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Antarctic Regions
  • Bacteria / classification
  • Bacteria / genetics
  • Bacteria / isolation & purification*
  • Bacteria / metabolism*
  • Biodiversity*
  • Carbon / analysis
  • Carbon / metabolism
  • DNA, Bacterial / genetics
  • Molecular Sequence Data
  • Nitrogen / analysis
  • Nitrogen / metabolism
  • RNA, Ribosomal, 16S / genetics
  • Soil / chemistry*
  • Soil Microbiology*
  • Water / analysis
  • Water / metabolism*

Substances

  • DNA, Bacterial
  • RNA, Ribosomal, 16S
  • Soil
  • Water
  • Carbon
  • Nitrogen