The E1 mechanism in photo-induced beta-elimination reactions for green-to-red conversion of fluorescent proteins

Chem Biol. 2009 Nov 25;16(11):1140-7. doi: 10.1016/j.chembiol.2009.10.010.

Abstract

KikGR is a fluorescent protein engineered to display green-to-red photoconvertibility that is induced by irradiation with ultraviolet or violet light. Similar to Kaede and EosFP, two naturally occurring photoconvertible proteins, KikGR contains a His(62)-Tyr(63)-Gly(64) tripeptide sequence, which forms a green chromophore that can be photoconverted to a red one via formal beta-elimination and subsequent extension of a pi-conjugated system. Using a crystallizable variant of KikGR, we determined the structures of both the green and red state at 1.55 A resolution. The double bond between His(62)-C(alpha) and His(62)-C(beta) in the red chromophore is in a cis configuration, indicating that rotation along the His(62) C(alpha)-C(beta) bond occurs following cleavage of the His(62) N(alpha)-C(alpha) bond. This structural rearrangement provides evidence that the beta-elimination reaction governing the green-to-red photoconversion of KikGR follows an E1 (elimination, unimolecular) mechanism.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Crystallography, X-Ray
  • Luminescent Proteins / chemistry*
  • Luminescent Proteins / metabolism
  • Luminescent Proteins / radiation effects
  • Molecular Sequence Data
  • Photochemical Processes
  • Protein Conformation
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / metabolism
  • Sequence Alignment
  • Ultraviolet Rays*

Substances

  • Kaede protein, Trachyphyllia geoffroyi
  • Luminescent Proteins
  • Recombinant Proteins

Associated data

  • PDB/2DDC
  • PDB/2DDD