1H, 15N and 13C assignments of the dimeric C-terminal domain of HIV-1 capsid protein

Biomol NMR Assign. 2010 Apr;4(1):21-3. doi: 10.1007/s12104-009-9198-9. Epub 2009 Nov 18.

Abstract

HIV-1 capsid protein (CA) encloses the viral RNA genome and forms a conical-shaped particle in the mature HIV-1 virion, with orderly capsid assembly and disassembly critically important for viral infectivity. The 231 residue CA is composed of two helical domains, connected by a short linker sequence. In solution, CA exhibits concentration dependent dimerization which is mediated by the C-terminal domain (CTD). Here, we present nearly complete (1)H, (15)N and (13)C assignments for the 20 kDa homodimeric CA-CTD, a prerequisite for structural characterization of the CA-CTD dimer.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Amino Acid Sequence
  • Capsid Proteins / chemistry*
  • Capsid Proteins / genetics
  • Carbon Isotopes / chemistry
  • HIV-1 / chemistry*
  • Hydrogen / chemistry
  • Models, Molecular
  • Nitrogen Isotopes / chemistry
  • Nuclear Magnetic Resonance, Biomolecular / methods
  • Protein Multimerization
  • Protein Structure, Secondary
  • Protein Structure, Tertiary
  • gag Gene Products, Human Immunodeficiency Virus / chemistry*
  • gag Gene Products, Human Immunodeficiency Virus / genetics

Substances

  • Capsid Proteins
  • Carbon Isotopes
  • Nitrogen Isotopes
  • gag Gene Products, Human Immunodeficiency Virus
  • Hydrogen