Cyclodextrins in DNA decompaction

Colloids Surf B Biointerfaces. 2010 Mar 1;76(1):20-7. doi: 10.1016/j.colsurfb.2009.10.001. Epub 2009 Oct 8.

Abstract

Individual T4DNA molecules, previously compacted by using a cationic surfactant (cetyltrimethylammonium bromide, CTAB), were successfully decompacted by the addition of an appropriate concentration of either alpha-cyclodextrin or beta-cyclodextrin (alpha-CD and beta-CD, respectively) due to the formation of inclusion complexes with the surfactant. The process was shown to be a non first-order transition from globules to coils. Density and sound velocity measurements as well as steady state fluorescence spectroscopy have confirmed the approximate CD concentration at which the globule-to-coil transition occurs. Phase maps of the DNA-CTA-CD systems were produced and the CTAB concentration range at which decompaction can be achieved was determined. Evidences for DNA-CD interaction were found, however, its nature and influence on the decompaction process was not yet determined.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Circular Dichroism
  • Cyclodextrins / chemistry
  • Cyclodextrins / pharmacology*
  • DNA / drug effects*
  • Microscopy, Atomic Force
  • Molecular Structure
  • Nucleic Acid Conformation / drug effects*
  • Solvents / chemistry
  • Surface-Active Agents / chemistry
  • Surface-Active Agents / pharmacology

Substances

  • Cyclodextrins
  • Solvents
  • Surface-Active Agents
  • DNA