Psychrobacter aestuarii sp. nov., isolated from a tidal flat sediment

Int J Syst Evol Microbiol. 2010 Jul;60(Pt 7):1631-1636. doi: 10.1099/ijs.0.016782-0. Epub 2009 Aug 28.

Abstract

A Gram-negative-staining, non-motile, non-spore-forming and strictly aerobic bacterial strain, SC35(T), was isolated from tidal flat sediment collected from the South Sea, Korea, and subjected to a taxonomic study using a polyphasic approach. The organism grew optimally at 20-30 degrees C and with 1-2 % (w/v) NaCl. Strain SC35(T) contained ubiquinone-8 as the predominant respiratory lipoquinone and C(18 : 1)omega9c as the major fatty acid. The DNA G+C content was 48.5 mol%. A phylogenetic tree based on 16S rRNA gene sequences showed that strain SC35(T) formed a lineage within the genus Psychrobacter (94.3-96.5 % sequence similarity), forming a distinct branch in a clade also containing Psychrobacter pacificensis NIBH P2K6(T) and Psychrobacter celer SW-238(T). On the basis of phenotypic and phylogenetic data, strain SC35(T) (=KCTC 22503(T)=JCM 16343(T)) was placed in the genus Psychrobacter as the type strain of a novel species, for which the name Psychrobacter aestuarii sp. nov. is proposed.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Sequence
  • Fatty Acids / analysis
  • Geologic Sediments / microbiology*
  • Molecular Sequence Data
  • Phylogeny
  • Psychrobacter / classification*
  • Psychrobacter / genetics
  • Psychrobacter / isolation & purification
  • Psychrobacter / physiology
  • RNA, Ribosomal, 16S / genetics
  • Seawater / microbiology*

Substances

  • Fatty Acids
  • RNA, Ribosomal, 16S

Associated data

  • GENBANK/EU939718