Identification of compounds exhibiting inhibitory activity toward the Pseudomonas tolaasii toxin tolaasin I using in silico docking calculations, NMR binding assays, and in vitro hemolytic activity assays

Bioorg Med Chem Lett. 2009 Aug 1;19(15):4321-4. doi: 10.1016/j.bmcl.2009.05.068. Epub 2009 May 27.

Abstract

Using in silico docking calculations, NMR analysis of target-ligand binding, and hemolytic activity assays, we searched a 30,000-compound library for an effective inhibitor of tolaasin I, a Pseudomonas tolaasii toxin that causes virulent infection in mushrooms. Of more than 30,000 compounds screened in silico, two compounds were selected. One of these compounds, sorbitololeic acid, bound to tolaasin I and inhibited its hemolytic activity in vitro. Therefore, sorbitololeic acid can be a potential inhibitor of tolaasin I.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Agaricales / metabolism
  • Bacterial Proteins / antagonists & inhibitors*
  • Bacterial Proteins / chemistry*
  • Chemistry, Pharmaceutical / methods*
  • Computational Biology / methods
  • Depsipeptides / antagonists & inhibitors*
  • Depsipeptides / chemistry*
  • Dose-Response Relationship, Drug
  • Drug Design
  • Hemolysis
  • Ligands
  • Magnetic Resonance Spectroscopy
  • Models, Chemical
  • Molecular Conformation
  • Molecular Structure
  • Peptides / chemistry
  • Protein Binding
  • Pseudomonas / metabolism*

Substances

  • Bacterial Proteins
  • Depsipeptides
  • Ligands
  • Peptides
  • tolaasin protein, Pseudomonas tolaasii