Donghicola xiamenensis sp. nov., a marine bacterium isolated from seawater of the Taiwan Strait in China

Int J Syst Evol Microbiol. 2009 May;59(Pt 5):1143-7. doi: 10.1099/ijs.0.000901-0.

Abstract

A Gram-negative, ovoid rod-shaped bacterium that lacked bacteriochlorophyll a, designated strain Y-2(T), was isolated from seawater of the Taiwan Strait, China. The strain was oxidase- and catalase-positive, and reduced nitrate to nitrite. Optimal growth occurred at around pH 7.0 and 25 degrees C in the presence of 1-3 % (w/v) NaCl. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain Y-2(T) belonged to the class Alphaproteobacteria and formed a coherent cluster with Donghicola eburneus SW-277(T) (96.2 % sequence similarity). The major whole-cell fatty acid was C(18 : 1)omega7c (75.42 %). Other characteristic fatty acids were C(18 : 0) (9.16 %) and C(16 : 0) (7.32 %). The DNA G+C content of strain Y-2(T) was 62.4 mol%. Therefore, based on phenotypic properties, phylogeny and genomic data, strain Y-2(T) should be placed in the genus Donghicola as representing a novel species, for which the name Donghicola xiamenensis sp. nov. is proposed. The type strain is Y-2(T) (=MCCC 1A00107(T)=LMG 24574(T)=CGMCC 1.7081(T)).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Typing Techniques
  • Base Composition
  • China
  • DNA, Bacterial / analysis
  • DNA, Ribosomal / analysis
  • Fatty Acids / analysis
  • Genes, rRNA
  • Molecular Sequence Data
  • Phenotype
  • Phylogeny
  • RNA, Ribosomal, 16S / genetics
  • Rhodobacteraceae / classification*
  • Rhodobacteraceae / genetics
  • Rhodobacteraceae / isolation & purification
  • Rhodobacteraceae / physiology
  • Seawater / microbiology*
  • Sequence Analysis, DNA
  • Species Specificity

Substances

  • DNA, Bacterial
  • DNA, Ribosomal
  • Fatty Acids
  • RNA, Ribosomal, 16S

Associated data

  • GENBANK/DQ120728