Mycobacterium noviomagense sp. nov.; clinical relevance evaluated in 17 patients

Int J Syst Evol Microbiol. 2009 Apr;59(Pt 4):845-9. doi: 10.1099/ijs.0.001511-0.

Abstract

Eighteen isolates of a nonchromogenic, slowly growing, non-tuberculous species of the genus Mycobacterium were cultured from respiratory specimens obtained over the last eight years from 17 patients in the Netherlands. These isolates were grouped because they revealed a unique 16S rRNA gene sequence and were related to Mycobacterium xenopi. None of the 17 patients met the American Thoracic Society diagnostic criteria for non-tuberculous mycobacterial disease, which distinguishes the novel isolates from the related species, M. xenopi. A polyphasic taxonomic approach, including identification by biochemical and phenotypical analysis, hsp65 gene sequencing and PCR restriction enzyme pattern analysis, and sequence analyses of the rpoB gene and 16S-23S internal transcribed spacer supported the separate species status of the novel isolates. The name Mycobacterium noviomagense sp. nov. is proposed for the novel strains. The type strain is NLA000500338(T) (=DSM 45145(T)=CIP 109766(T)). A more distinctive taxonomy of NTM is a prerequisite for the assessment of their clinical relevance.

MeSH terms

  • Bacterial Proteins / genetics
  • Bacterial Typing Techniques
  • Chaperonin 60
  • Chaperonins / genetics
  • Cluster Analysis
  • DNA Fingerprinting
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / genetics
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / genetics
  • DNA, Ribosomal Spacer / chemistry
  • DNA, Ribosomal Spacer / genetics
  • DNA-Directed RNA Polymerases / genetics
  • Genotype
  • Humans
  • Molecular Sequence Data
  • Mycobacterium / classification*
  • Mycobacterium / genetics
  • Mycobacterium / isolation & purification*
  • Mycobacterium / physiology
  • Mycobacterium Infections / microbiology*
  • Netherlands
  • Phylogeny
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA
  • Sequence Homology, Nucleic Acid

Substances

  • Bacterial Proteins
  • Chaperonin 60
  • DNA, Bacterial
  • DNA, Ribosomal
  • DNA, Ribosomal Spacer
  • RNA, Ribosomal, 16S
  • heat-shock protein 65, Mycobacterium
  • DNA-Directed RNA Polymerases
  • RNA polymerase beta subunit
  • Chaperonins

Associated data

  • GENBANK/EU239955
  • GENBANK/EU439248
  • GENBANK/EU439249
  • GENBANK/EU600390
  • GENBANK/EU810775