Resampling and editing of mischarged tRNA prior to translation elongation

Mol Cell. 2009 Mar 13;33(5):654-60. doi: 10.1016/j.molcel.2009.01.031.

Abstract

Faithful translation of the genetic code depends on the GTPase EF-Tu delivering correctly charged aminoacyl-tRNAs to the ribosome for pairing with cognate codons. The accurate coupling of cognate amino acids and tRNAs by the aminoacyl-tRNA synthetases is achieved through a combination of substrate specificity and product editing. Once released by aminoacyl-tRNA synthetases, both cognate and near-cognate aminoacyl-tRNAs were considered to be committed to ribosomal protein synthesis through their association with EF-Tu. Here we show instead that aminoacyl-tRNAs in ternary complex with EF-Tu*GTP can readily dissociate and rebind to aminoacyl-tRNA synthetases. For mischarged species, this allows resampling by the product editing pathway, leading to a reduction in the overall error rate of aminoacyl-tRNA synthesis. Resampling of mischarged tRNAs was shown to increase the accuracy of translation over ten fold during in vitro protein synthesis, supporting the presence of an additional quality control step prior to translation elongation.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Amino Acyl-tRNA Synthetases / metabolism*
  • Binding Sites
  • Escherichia coli / enzymology*
  • Escherichia coli / genetics
  • Escherichia coli Proteins / metabolism*
  • Genetic Code
  • Guanosine Triphosphate / metabolism*
  • Kinetics
  • Leucine-tRNA Ligase / metabolism
  • Nucleic Acid Conformation
  • Peptide Chain Elongation, Translational*
  • Peptide Elongation Factor Tu / metabolism*
  • Peptides / metabolism
  • Phenylalanine-tRNA Ligase / metabolism
  • RNA, Bacterial
  • RNA, Transfer / chemistry
  • RNA, Transfer / metabolism*
  • Substrate Specificity
  • Transfer RNA Aminoacylation*
  • Tyrosine-tRNA Ligase / metabolism

Substances

  • Escherichia coli Proteins
  • Peptides
  • RNA, Bacterial
  • polyphenylalanine
  • polytyrosine
  • Guanosine Triphosphate
  • RNA, Transfer
  • Peptide Elongation Factor Tu
  • Amino Acyl-tRNA Synthetases
  • Tyrosine-tRNA Ligase
  • Phenylalanine-tRNA Ligase
  • Leucine-tRNA Ligase