Bivalves are regularly used as biomonitors of contaminants in coastal and estuarine waters. We used oysters to assess short term changes in metal availability caused by the resuspension of contaminated sediments. Sydney Rock Oysters, Saccostrea glomerata, were deployed at multiple sites in Port Kembla Harbour and two reference estuaries for 11weeks before dredging and for two equivalent periods during dredging. Saccostrea experienced large increases in accumulation of zinc, copper and tin during dredging in the Port relative to oysters deployed in reference estuaries. Lead and tin were found to be permanently elevated within Port Kembla. We present a clear and un-confounded demonstration of the potential for dredging activities to cause large scale increases in water column contamination. Our results also demonstrate the usefulness of external reference locations in overcoming temporal confounding in bioaccumulation studies.