Identification and analysis of new proteins involved in the DNA damage response network of Fanconi anemia and Bloom syndrome

Methods. 2009 May;48(1):72-9. doi: 10.1016/j.ymeth.2009.02.011. Epub 2009 Feb 24.

Abstract

The use of co-immunoprecipitation (co-IP) to purify multi-protein complexes has contributed greatly to our understanding of the DNA damage response network associated with Fanconi anemia (FA), Bloom syndrome (BS) and breast cancer. Four new FA genes and two new protein partners for the Bloom syndrome gene product have been identified by co-IP. Here, we discuss our experience in using co-IP and other techniques to isolate and characterize new FA and BS-related proteins.

Publication types

  • Research Support, N.I.H., Extramural
  • Review

MeSH terms

  • Bloom Syndrome / genetics*
  • Bloom Syndrome / metabolism
  • Carrier Proteins / analysis*
  • Carrier Proteins / isolation & purification
  • Carrier Proteins / metabolism
  • DNA Damage*
  • DNA Topoisomerases, Type I / analysis*
  • DNA Topoisomerases, Type I / isolation & purification
  • DNA Topoisomerases, Type I / metabolism
  • DNA-Binding Proteins / analysis*
  • DNA-Binding Proteins / isolation & purification
  • DNA-Binding Proteins / metabolism
  • Fanconi Anemia / genetics*
  • Fanconi Anemia / metabolism
  • Humans
  • Nuclear Proteins / analysis*
  • Nuclear Proteins / isolation & purification
  • Nuclear Proteins / metabolism
  • RecQ Helicases / analysis*
  • RecQ Helicases / isolation & purification
  • RecQ Helicases / metabolism

Substances

  • Carrier Proteins
  • DNA-Binding Proteins
  • Nuclear Proteins
  • RMI1 protein, human
  • RMI2 protein, human
  • Bloom syndrome protein
  • RecQ Helicases
  • DNA Topoisomerases, Type I