Dissecting the splicing mechanism of the Drosophila editing enzyme; dADAR

Nucleic Acids Res. 2009 Apr;37(5):1663-71. doi: 10.1093/nar/gkn1080. Epub 2009 Jan 19.

Abstract

In Drosophila melanogaster, the expression of adenosine deaminase acting on RNA is regulated by transcription and alternative splicing so that at least four different isoforms are generated that have a tissue-specific splicing pattern. Even though dAdar has been extensively studied, the complete adult expression pattern has yet to be elucidated. In the present study, we investigate mature transcripts of dAdar arising from different promoters. Two predominant isoforms of dAdar are expressed in gonads and dAdar is transcribed from both the embryonic and the adult promoters. Furthermore, full-length transcripts containing the alternatively spliced exon-1 are expressed in a tissue-specific manner. The splicing factor B52/SRp55 binds within the alternative spliced exon 3a and plays a role in this alternative splicing event.

Publication types

  • Research Support, Non-U.S. Gov't
  • Retracted Publication

MeSH terms

  • Adenosine Deaminase / genetics*
  • Adenosine Deaminase / metabolism
  • Alternative Splicing*
  • Animals
  • Binding Sites
  • Cell Line
  • Drosophila Proteins / genetics*
  • Drosophila Proteins / metabolism
  • Drosophila melanogaster / embryology
  • Drosophila melanogaster / enzymology*
  • Drosophila melanogaster / genetics
  • Exons
  • Female
  • Isoenzymes / genetics
  • Isoenzymes / metabolism
  • Male
  • Nuclear Proteins / metabolism
  • Oocytes / metabolism
  • Ovary / embryology
  • Ovary / metabolism
  • Phosphoproteins / metabolism
  • RNA Editing
  • RNA Splicing Factors
  • RNA, Messenger / metabolism
  • RNA-Binding Proteins
  • Testis / metabolism

Substances

  • Drosophila Proteins
  • Isoenzymes
  • Nuclear Proteins
  • Phosphoproteins
  • RNA Splicing Factors
  • RNA, Messenger
  • RNA-Binding Proteins
  • B52 protein, Drosophila
  • ADARB1 protein, human
  • Adenosine Deaminase