Fluorescence detection of the movement of single KcsA subunits reveals cooperativity

Proc Natl Acad Sci U S A. 2008 Dec 23;105(51):20263-8. doi: 10.1073/pnas.0807056106. Epub 2008 Dec 11.

Abstract

The prokaryotic KcsA channel is gated at the helical bundle crossing by intracellular protons and inactivates at the extracellular selectivity filter. The C-terminal transmembrane helix has to undergo a conformational change for potassium ions to access the central cavity. Whereas a partial opening of the tetrameric channel is suggested to be responsible for subconductance levels of ion channels, including KcsA, a cooperative opening of the 4 subunits is postulated as the final opening step. In this study, we used single-channel fluorescence spectroscopy of KcsA to directly observe the movement of each subunit and the temporal correlation between subunits. Purified KcsA channels labeled at the C terminus near the bundle crossing have been inserted into supported lipid bilayer, and the fluorescence traces analyzed by means of a cooperative or independent Markov model. The analysis revealed that the 4 subunits do not move fully independently but instead showed a certain degree of cooperativity. However, the 4 subunits do not simply open in 1 concerted step.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Proteins / chemistry
  • Bacterial Proteins / metabolism*
  • Lipid Bilayers
  • Markov Chains
  • Motion
  • Potassium Channels / chemistry
  • Potassium Channels / metabolism*
  • Protein Subunits
  • Spectrometry, Fluorescence / methods*

Substances

  • Bacterial Proteins
  • Lipid Bilayers
  • Potassium Channels
  • Protein Subunits
  • prokaryotic potassium channel