Structural and dynamic characterization of intrinsically disordered human securin by NMR spectroscopy

J Am Chem Soc. 2008 Dec 17;130(50):16873-9. doi: 10.1021/ja805510b.

Abstract

Understanding the molecular action of securin, the inhibitor of separase in mitosis, is of immense theoretical and biomedical importance. The residue-level structural description of an intrinsically disordered protein of this length (202 amino acids, containing 24 prolines), however, represents a particular challenge. Here we combined (1)H-detected and (13)C-detected protonless NMR experiments to achieve full assignment of securin's backbone amide resonances. Chemical shifts, (15)N relaxation rates (R(1), R(2), (1)H-(15)N NOEs), (1)H exchange rates with the solvent (CLEANEX-PM), and (1)H-(15)N residual dipolar couplings were determined along the entire length of the protein. This analysis showed that securin is not entirely disordered, but segregates into a largely disordered N-terminal half and a C-terminal half with transient segmental order, within which the segment D(150)-F(159) has a significant helical tendency and segments E(113)-S(127) and W(174)-L(178) also show a significant deviation from random-coil behavior. These results, in combination with bioinformatic and biochemical data on the securin/separase interaction, shed light on the inhibitory action of securin on separase.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Algorithms
  • Cell Cycle Proteins / metabolism
  • Endopeptidases / metabolism
  • Humans
  • Neoplasm Proteins / chemistry*
  • Neoplasm Proteins / genetics
  • Neoplasm Proteins / metabolism
  • Nuclear Magnetic Resonance, Biomolecular
  • Securin
  • Separase

Substances

  • Cell Cycle Proteins
  • Neoplasm Proteins
  • Securin
  • pituitary tumor-transforming protein 1, human
  • Endopeptidases
  • ESPL1 protein, human
  • Separase