Heterologous expression of polyhydroxyalkanoate depolymerase from Thermobifida sp. in Pichia pastoris and catalytic analysis by surface plasmon resonance

Appl Microbiol Biotechnol. 2009 Feb;82(1):131-40. doi: 10.1007/s00253-008-1754-1. Epub 2008 Nov 12.

Abstract

A polyhydroxyalkanote depolymerase gene from Thermobifida sp. isolate BCC23166 was cloned and expressed as a C-terminal His(6)-tagged fusion in Pichia pastoris. Primary structure analysis revealed that the enzyme PhaZ-Th is a member of a proposed new subgroup of SCL-PHA depolymerase containing a proline-serine repeat linker. PhaZ-Th was expressed as two glycosylated forms with apparent molecular weights of 61 and 70 kDa, respectively. The enzyme showed esterase activity toward p-nitrophenyl alkanotes with V(max) and K(m) of 3.63 +/- 0.16 micromol min(-1) mg(-1) and 0.79 +/- 0.12 mM, respectively, on p-nitrophenyl butyrate with optimal activity at 50-55 degrees C and pH 7-8. Surface plasmon resonance (SPR) analysis demonstrated that PhaZ-Th catalyzed the degradation of poly-[(R)-3-hydroxybutyrate] (PHB) films, which was accelerated in (R)-3-hydroxyvalerate copolymers with a maximum degradation rate of 882 ng cm(-2) h(-1) for poly[(R)-3-hydroxybutyrate-co-3-hydroxyvalerate] (12 mol% V). Surface deterioration, especially on the amorphous regions of PHB films was observed after exposure to PhaZ-Th by atomic force microscopy. The use of P. pastoris as an alternative recombinant system for bioplastic degrading enzymes in secreted form and a sensitive SPR analytical technique will be of utility for further study of bioplastic degradation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Actinomycetales / chemistry
  • Actinomycetales / enzymology*
  • Actinomycetales / genetics
  • Actinomycetales / isolation & purification
  • Amino Acid Sequence
  • Bacterial Proteins / chemistry*
  • Bacterial Proteins / genetics
  • Bacterial Proteins / metabolism
  • Carboxylic Ester Hydrolases / chemistry*
  • Carboxylic Ester Hydrolases / genetics
  • Carboxylic Ester Hydrolases / metabolism
  • Catalysis
  • Cloning, Molecular
  • Gene Expression*
  • Molecular Sequence Data
  • Pichia / genetics*
  • Pichia / metabolism
  • Sequence Alignment
  • Surface Plasmon Resonance

Substances

  • Bacterial Proteins
  • Carboxylic Ester Hydrolases
  • poly(3-hydroxyalkanoic acid) depolymerase

Associated data

  • GENBANK/EU797472