Cloning of the Trichoderma reesei cDNA encoding a glucuronan lyase belonging to a novel polysaccharide lyase family

Appl Environ Microbiol. 2009 Jan;75(1):101-7. doi: 10.1128/AEM.01749-08. Epub 2008 Oct 31.

Abstract

The filamentous fungus Trichoderma reesei produces glucuronan lyase (TrGL) when it is grown on beta-(1-->4)-polyglucuronate (cellouronate) as a sole carbon source. The cDNA encoding TrGL was cloned, and the recombinant enzyme was heterologously expressed in Pichia pastoris. The cDNA of TrGL includes a 777-bp open reading frame encoding a 20-amino-acid signal peptide and the 238-amino-acid mature protein. The amino acid sequence showed no similarity to the amino acid sequences of previously described functional proteins, indicating that the enzyme should be classified in a novel polysaccharide lyase (PL) family. Recombinant TrGL catalyzed depolymerization of cellouronate endolytically by beta-elimination and was highly specific for cellouronate. The enzyme was most active at pH 6.5 and 50 degrees C, and its activity and thermostability increased in the presence of Ca2+, suggesting that its calcium dependence is similar to that of other PLs, such as pectate lyases.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Calcium / pharmacology
  • Cloning, Molecular*
  • DNA, Fungal / chemistry
  • DNA, Fungal / genetics
  • Enzyme Activators / pharmacology
  • Enzyme Stability
  • Fungal Proteins / chemistry
  • Fungal Proteins / genetics*
  • Fungal Proteins / metabolism*
  • Hydrogen-Ion Concentration
  • Molecular Sequence Data
  • Open Reading Frames
  • Pichia / genetics
  • Polysaccharide-Lyases / chemistry
  • Polysaccharide-Lyases / genetics*
  • Polysaccharide-Lyases / metabolism*
  • Polysaccharides / metabolism
  • Protein Sorting Signals
  • Sequence Analysis, DNA
  • Sequence Homology, Amino Acid
  • Substrate Specificity
  • Temperature
  • Trichoderma / enzymology*
  • Trichoderma / genetics

Substances

  • DNA, Fungal
  • Enzyme Activators
  • Fungal Proteins
  • Polysaccharides
  • Protein Sorting Signals
  • Polysaccharide-Lyases
  • glucuronan lyase
  • Calcium

Associated data

  • GENBANK/AB440265