Imaging target mRNA and siRNA-mediated gene silencing in vivo with ribozyme-based reporters

Chembiochem. 2008 Nov 3;9(16):2682-91. doi: 10.1002/cbic.200800370.

Abstract

Noninvasive imaging of specific mRNAs in living subjects promises numerous biological and medical applications. Common strategies use fluorescently or radioactively labelled antisense probes to detect target mRNAs through a hybridization mechanism, but have met with limited success in living animals. Here we present a novel molecular imaging approach based on the group I intron of Tetrahymena thermophila for imaging mRNA molecules in vivo. Engineered trans-splicing ribozyme reporters contain three domains, each of which is designed for targeting, splicing, and reporting. They can transduce the target mRNA into a reporter mRNA, leading to the production of reporter enzymes that can be noninvasively imaged in vivo. We have demonstrated this ribozyme-mediated RNA imaging method for imaging a mutant p53 mRNA both in single cells and noninvasively in living mice. After optimization, the ribozyme reporter increases contrast for the transiently expressed target by 180-fold, and by ten-fold for the stably expressed target. siRNA-mediated specific gene silencing of p53 expression has been successfully imaged in real time in vivo. This new ribozyme-based RNA reporter system should open up new avenues for in vivo RNA imaging and direct imaging of siRNA inhibition.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Animals
  • Base Sequence
  • COS Cells
  • Chlorocebus aethiops
  • Exons
  • Gene Silencing*
  • Genes, Reporter / genetics*
  • Genes, p53 / genetics
  • Humans
  • Luciferases / genetics
  • Luciferases / metabolism
  • Mice
  • Mutation
  • Protein Biosynthesis
  • RNA Stability
  • RNA, Catalytic / genetics*
  • RNA, Catalytic / metabolism*
  • RNA, Messenger / analysis*
  • RNA, Messenger / chemistry
  • RNA, Messenger / genetics
  • RNA, Small Interfering / genetics
  • RNA, Small Interfering / metabolism*
  • Tetrahymena thermophila / enzymology
  • Tetrahymena thermophila / genetics
  • Time Factors
  • beta-Lactamases / genetics
  • beta-Lactamases / metabolism

Substances

  • RNA, Catalytic
  • RNA, Messenger
  • RNA, Small Interfering
  • Luciferases
  • beta-Lactamases