Acid-base properties and DNA-binding of water soluble N-confused porphyrins with cationic side-arms

Org Biomol Chem. 2008 Nov 21;6(22):4157-66. doi: 10.1039/b810171j. Epub 2008 Sep 16.

Abstract

Water soluble N-confused porphyrins, 5,10,15,20-tetrakis(alpha-pyridinio-p-tolyl)-2-aza-21-carbaporphyrin (pPyNCP) and its N-methyl derivative, 2-N-methyl-5,10,15,20-tetrakis(alpha-pyridinio-p-tolyl)-2-aza-21-carbaporphyrin (NMe-pPyNCP), have been synthesized by introducing cationic side-arms at the meso-positions of N-confused porphyrin. Their acid-base properties (pK(1-4)) and DNA-binding ability in aqueous solutions were elucidated in comparison with the corresponding porphyrin derivative. Photophysical behaviors of pPyNCP were largely influenced by buffer compositions and DNA structures, whereas NMe-pPyNCP is considerably robust against these factors. In addition, significant enhancement of the fluorescence was observed with NMe-pPyNCP by the addition of DNA. The unique properties of pPyNCP and NMe-pPyNCP stem from the confused pyrrole rings in the macrocycle.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • DNA / chemistry*
  • DNA, Single-Stranded / chemistry
  • Hydrogen-Ion Concentration
  • Nitrogen / chemistry*
  • Porphyrins / chemistry*
  • Solubility
  • Water / chemistry*

Substances

  • DNA, Single-Stranded
  • Porphyrins
  • Water
  • DNA
  • Nitrogen