Mariniflexile fucanivorans sp. nov., a marine member of the Flavobacteriaceae that degrades sulphated fucans from brown algae

Int J Syst Evol Microbiol. 2008 Sep;58(Pt 9):2107-13. doi: 10.1099/ijs.0.65674-0.

Abstract

A rod-shaped, Gram-negative, chemo-organotrophic, heterotrophic, strictly aerobic, gliding bacterial strain, SW5(T), capable of degrading sulphated fucans from brown algae was isolated from a water-treatment facility that recycles the effluent of an alginate-extraction plant in Landerneau (Brittany, France). Its taxonomic position was investigated by a polyphasic approach. Strain SW5(T) formed dark-yellow colonies, was oxidase-negative and catalase-positive and grew optimally at 25 degrees C and pH 7.5 and in the presence of 2.5% (w/v) NaCl. The DNA G+C content was 34.5 mol%. Phylogenetic analysis based on the sequence of the 16S rRNA gene allocated strain SW5(T) to the genus Mariniflexile in the family Flavobacteriaceae, with a similarity of 98.4 % to the type strain of Mariniflexile gromovii, the only recognized Mariniflexile species. Its low level of DNA-DNA relatedness (<25%) with the type strain of this species and differentiating phenotypic characteristics demonstrated that strain SW5(T) constitutes a novel Mariniflexile species, for which the name Mariniflexile fucanivorans sp. nov. is proposed. Strain SW5(T) (=CIP 109502(T) =DSM 18792(T)) is the type strain.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aerobiosis
  • Bacterial Proteins / analysis
  • Bacterial Typing Techniques
  • Base Composition
  • Catalase / metabolism
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / genetics
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / genetics
  • Electrophoresis, Polyacrylamide Gel
  • Fatty Acids / analysis
  • Flavobacteriaceae / classification*
  • Flavobacteriaceae / isolation & purification*
  • Flavobacteriaceae / metabolism
  • France
  • Genes, rRNA
  • Hydrogen-Ion Concentration
  • Locomotion
  • Molecular Sequence Data
  • Nucleic Acid Hybridization
  • Oxidoreductases / metabolism
  • Phaeophyceae / chemistry
  • Phylogeny
  • Polysaccharides / metabolism*
  • Proteome / analysis
  • RNA, Bacterial / genetics
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA
  • Sequence Homology, Nucleic Acid
  • Sodium Chloride / metabolism
  • Temperature
  • Water Microbiology*

Substances

  • Bacterial Proteins
  • DNA, Bacterial
  • DNA, Ribosomal
  • Fatty Acids
  • Polysaccharides
  • Proteome
  • RNA, Bacterial
  • RNA, Ribosomal, 16S
  • Sodium Chloride
  • fucoidan
  • Oxidoreductases
  • Catalase

Associated data

  • GENBANK/AJ628046