Real-time PCR detection of gyrA and parC mutations in Streptococcus pneumoniae

Antimicrob Agents Chemother. 2008 Nov;52(11):4155-8. doi: 10.1128/AAC.00082-08. Epub 2008 Aug 25.

Abstract

Fluoroquinolone resistance in Streptococcus pneumoniae mainly involves stepwise mutations predominantly in the parC and gyrA genes. We have developed a single-run real-time PCR assay for detection of the four most common mutations in the quinolone resistance-determining regions of these genes. This assay provides a useful tool for both clinical and epidemiological use.

MeSH terms

  • Amino Acid Substitution
  • Base Sequence
  • DNA Gyrase / chemistry
  • DNA Gyrase / genetics*
  • DNA Mutational Analysis / methods
  • DNA Primers / genetics
  • DNA Probes / chemistry
  • DNA Probes / genetics
  • DNA Topoisomerase IV / chemistry
  • DNA Topoisomerase IV / genetics*
  • DNA, Bacterial / genetics
  • Drug Resistance, Bacterial / genetics
  • Fluoroquinolones / pharmacology
  • Genes, Bacterial
  • Humans
  • Nucleic Acid Denaturation
  • Point Mutation
  • Polymerase Chain Reaction / methods*
  • Streptococcus pneumoniae / drug effects
  • Streptococcus pneumoniae / enzymology*
  • Streptococcus pneumoniae / genetics*
  • Streptococcus pneumoniae / isolation & purification
  • Thermodynamics

Substances

  • DNA Primers
  • DNA Probes
  • DNA, Bacterial
  • Fluoroquinolones
  • DNA Topoisomerase IV
  • DNA Gyrase