Evidences for complex formation between L-dabPNA and aegPNA

Bioorg Med Chem Lett. 2008 Sep 1;18(17):4757-60. doi: 10.1016/j.bmcl.2008.08.005. Epub 2008 Aug 6.

Abstract

Continuing our research on the development of nucleopeptides as ODN analogs for biomedical and bioengineering applications, here we report the synthesis and the chemical-physical characterization of a homoadenine hexamer based on a l-diaminobutyric acid (l-DABA) backbone (dabPNA), and its binding studies with a complementary aegPNA. We demonstrated by CD and UV experiments that the l-dabPNA binds the aegPNA forming a complex with good thermal stability, that we identified as a left-handed triplex.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adenine Nucleotides / chemical synthesis
  • Adenine Nucleotides / chemistry
  • Adenine Nucleotides / metabolism
  • Aminobutyrates / chemistry*
  • Aminobutyrates / metabolism*
  • Circular Dichroism
  • DNA / chemistry
  • DNA / metabolism
  • Drug Design
  • Glycine / analogs & derivatives*
  • Glycine / chemistry
  • Glycine / metabolism
  • Magnetic Resonance Spectroscopy
  • Peptide Nucleic Acids / chemical synthesis
  • Peptide Nucleic Acids / chemistry*
  • Peptide Nucleic Acids / isolation & purification
  • Peptide Nucleic Acids / metabolism*
  • Spectrometry, Mass, Electrospray Ionization

Substances

  • Adenine Nucleotides
  • Aminobutyrates
  • Peptide Nucleic Acids
  • aminoethylglycyl PNA
  • triplex DNA
  • DNA
  • Glycine