Dissection and identification of regions required to form pseudoparticles by the interaction between the nucleocapsid (N) and membrane (M) proteins of SARS coronavirus

Virology. 2008 Oct 10;380(1):99-108. doi: 10.1016/j.virol.2008.07.012. Epub 2008 Aug 13.

Abstract

When expressed in mammalian cells, the nucleocapsid (N) and membrane (M) proteins of the severe acute respiratory syndrome coronavirus (SARS-CoV) are sufficient to form pseudoparticles. To identify region(s) of the N molecule required for pseudoparticle formation, we performed biochemical analysis of the interaction of N mutants and M in HEK293 cells. Using a peptide library derived from N, we found that amino acids 101-115 constituted a novel binding site for M. We examined the ability of N mutants to interact with M and form pseudoparticles, and our observations indicated that M bound to NDelta(101-115), N1-150, N151-300, and N301-422, but not to N1-150Delta(101-115). However, pseudoparticles were formed when NDelta(101-115) or N301-422, but not N1-150 or N151-300, were expressed with M in HEK293 cells. These results indicated that the minimum portion of N required for the interaction with M and pseudoparticle formation consists of amino acids 301-422.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cell Line
  • Coronavirus M Proteins
  • Coronavirus Nucleocapsid Proteins
  • Nucleocapsid / genetics
  • Nucleocapsid / metabolism
  • Nucleocapsid Proteins / chemistry
  • Nucleocapsid Proteins / genetics
  • Nucleocapsid Proteins / metabolism*
  • RNA, Viral / chemistry
  • RNA, Viral / genetics*
  • Severe acute respiratory syndrome-related coronavirus / chemistry*
  • Viral Matrix Proteins / genetics
  • Viral Matrix Proteins / metabolism*

Substances

  • Coronavirus M Proteins
  • Coronavirus Nucleocapsid Proteins
  • M protein, SARS-CoV
  • Nucleocapsid Proteins
  • RNA, Viral
  • Viral Matrix Proteins