Molecular characterisation of a cypovirus isolated from the western spruce budworm Choristoneura occidentalis

Arch Virol. 2008;153(9):1759-63. doi: 10.1007/s00705-008-0175-x. Epub 2008 Aug 10.

Abstract

A novel cypovirus, assigned CoCPV, was isolated from natural populations of the western spruce budworm, Choristoneura occidentalis. The complete nucleotide sequences of genomic segments S2-S5 and S7-S10 were determined. Each segment contained a single open reading frame. Conserved motifs 5' (AGUUU......UUUGUGC) 3' were found at the ends of each segment. Analysis of S2, which encoded a putative RNA-dependent RNA polymerase protein, confirmed CoCPV belonged to the genus Cypovirus within the family Reoviridae. Further phylogenetic analysis using S10 (the polyhedrin gene) aligned this virus with species type-16, closely related to a cypovirus isolated from C. fumiferana.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Base Sequence
  • Molecular Sequence Data
  • Moths / virology*
  • Open Reading Frames
  • Phylogeny
  • RNA-Dependent RNA Polymerase / genetics
  • Reoviridae / classification*
  • Reoviridae / genetics
  • Reoviridae / isolation & purification*
  • Viral Proteins / genetics

Substances

  • Viral Proteins
  • RNA-Dependent RNA Polymerase

Associated data

  • GENBANK/EU201036
  • GENBANK/EU201037
  • GENBANK/EU201038
  • GENBANK/EU201039
  • GENBANK/EU201040
  • GENBANK/EU201041
  • GENBANK/EU201042
  • GENBANK/EU201043
  • GENBANK/EU486988
  • GENBANK/EU486989
  • GENBANK/EU486990