Design and synthesis of a novel DNA-encoded chemical library using Diels-Alder cycloadditions

Bioorg Med Chem Lett. 2008 Nov 15;18(22):5926-31. doi: 10.1016/j.bmcl.2008.07.038. Epub 2008 Jul 15.

Abstract

DNA-encoded chemical libraries are increasingly being employed for the identification of binding molecules to protein targets of pharmaceutical relevance. Here, we describe the synthesis and characterization of a DNA-encoded chemical library, consisting of 4000 compounds generated by Diels-Alder cycloaddition reactions. The compounds were encoded with unique DNA fragments which were generated through a stepwise assembly process and serve as amplifiable bar codes for the identification and relative quantification of library members.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Sequence
  • Combinatorial Chemistry Techniques*
  • DNA / chemistry*
  • DNA / genetics*
  • Gene Library
  • Molecular Sequence Data
  • Molecular Structure
  • Oligonucleotides / chemical synthesis*
  • Streptavidin

Substances

  • Oligonucleotides
  • DNA
  • Streptavidin