Glycoprotein gene truncation in avian metapneumovirus subtype C isolates from the United States

Virus Genes. 2008 Oct;37(2):266-72. doi: 10.1007/s11262-008-0220-6. Epub 2008 Jul 29.

Abstract

The length of the published glycoprotein (G) gene sequences of avian metapneumovirus subtype-C (aMPV-C) isolated from domestic turkeys and wild birds in the United States (1996-2003) remains controversial. To explore the G gene size variation in aMPV-C by the year of isolation and cell culture passage levels, we examined 21 turkey isolates of aMPV-C at different cell culture passages. The early domestic turkey isolates of aMPV-C (aMPV/CO/1996, aMPV/MN/1a-b, and 2a-b/97) had a G gene of 1,798 nucleotides (nt) that coded for a predicted protein of 585 amino acids (aa) and showed >97% nt similarity with that of aMPV-C isolated from Canada geese. This large G gene got truncated upon serial passages in Vero cell cultures by deletion of 1,015 nt near the end of the open reading frame. The recent domestic turkey isolates of aMPV-C lacked the large G gene but instead had a small G gene of 783 nt, irrespective of cell culture passage levels. In some cultures, both large and small genes were detected, indicating the existence of a mixed population of the virus. Apparently, serial passage of aMPV-C in cell cultures and natural passage in turkeys in the field led to truncation of the G gene, which may be a mechanism of virus evolution for survival in a new host or environment.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Animals
  • Base Sequence
  • Chlorocebus aethiops
  • Metapneumovirus / genetics*
  • Metapneumovirus / isolation & purification*
  • Molecular Sequence Data
  • Paramyxoviridae Infections / veterinary*
  • Paramyxoviridae Infections / virology
  • Poultry Diseases / virology*
  • Sequence Deletion*
  • Serial Passage
  • Turkey
  • United States
  • Vero Cells
  • Viral Envelope Proteins / genetics*

Substances

  • Viral Envelope Proteins