Use of a halogenase of hormaomycin biosynthesis for formation of new clorobiocin analogues with 5-chloropyrrole moieties

Chembiochem. 2008 Aug 11;9(12):1992-9. doi: 10.1002/cbic.200800186.

Abstract

The depsipeptide antibiotic hormaomycin, which is produced by Streptomyces griseoflavus W-384, contains a 5-chloropyrrole moiety. In the producer strain we identified the gene hrmQ that shows sequence similarity to FADH(2)-dependent halogenases. This gene was cloned and heterologously expressed in Streptomyces roseochromogenes var. oscitans DS12.976, which is the producer of the aminocoumarin antibiotic clorobiocin, which contains a 5-methylpyrrole moiety. For the present experiment, we used a mutant of this strain in which the respective pyrrole-5-methyltransferase had been inactivated. Expression of the halogenase hrmQ in this mutant strain led to the formation of two new clorobiocin derivatives that carried a 5-chloropyrrole moiety. These compounds were isolated on a preparative scale, their structures were elucidated by (1)H NMR spectroscopy and mass spectrometry, and their antibacterial activity was determined. The substrate of HrmQ is likely to be a pyrrole-2-carboxyl-S-[acyl carrier protein] thioester. If this assumption is true, this study presents the first experiment in combinatorial biosynthesis that uses a halogenase that acts on an acyl carrier protein-bound substrate.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Anti-Bacterial Agents / chemistry
  • Anti-Bacterial Agents / pharmacology
  • Bacillus subtilis / drug effects
  • Cloning, Molecular
  • Depsipeptides / biosynthesis*
  • Gene Expression Regulation, Bacterial
  • Molecular Sequence Data
  • Novobiocin / analogs & derivatives*
  • Novobiocin / chemistry
  • Novobiocin / pharmacology
  • Oxidoreductases / metabolism*
  • Pyrroles / chemistry*
  • Sequence Analysis, DNA
  • Streptomyces / enzymology
  • Streptomyces / genetics*
  • Streptomyces / metabolism*

Substances

  • Anti-Bacterial Agents
  • Depsipeptides
  • Pyrroles
  • hormaomycin
  • Novobiocin
  • clorobiocin
  • Oxidoreductases

Associated data

  • GENBANK/EU583477