A new protein carrying an NmrA-like domain is required for cell differentiation and development in Dictyostelium discoideum

Dev Biol. 2008 Sep 15;321(2):331-42. doi: 10.1016/j.ydbio.2008.06.027. Epub 2008 Jun 28.

Abstract

We have isolated a Dictyostelium mutant unable to induce expression of the prestalk-specific marker ecmB in monolayer assays. The disrupted gene, padA, leads to a range of phenotypic defects in growth and development. We show that padA is essential for growth, and we have generated a thermosensitive mutant allele, padA(-). At the permissive temperature, mutant cells grow poorly; they remain longer at the slug stage during development and are defective in terminal differentiation. At the restrictive temperature, growth is completely blocked, while development is permanently arrested prior to culmination. padA(-) slugs are deficient in prestalk A cell differentiation and present an abnormal ecmB expression pattern. Sequence comparisons and predicted three-dimensional structure analyses show that PadA carries an NmrA-like domain. NmrA is a negative transcriptional regulator involved in nitrogen metabolite repression in Aspergillus nidulans. PadA predicted structure shows a NAD(P)(+)-binding domain, which we demonstrate that is essential for function. We show that padA(-) development is more sensitive to ammonia than wild-type cells and two ammonium transporters, amtA and amtC, appear derepressed during padA(-) development. Our data suggest that PadA belongs to a new family of NAD(P)(+)-binding proteins that link metabolic changes to gene expression and is required for growth and normal development.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Cell Differentiation / physiology*
  • Computational Biology
  • DNA Primers / genetics
  • Dictyostelium / growth & development*
  • Fungal Proteins / genetics
  • Gene Expression Regulation, Developmental / genetics*
  • In Situ Hybridization
  • Mutagenesis
  • Protein Structure, Tertiary / genetics
  • Protozoan Proteins / genetics
  • Protozoan Proteins / metabolism*
  • Reverse Transcriptase Polymerase Chain Reaction
  • Temperature
  • Transcription Factors / genetics

Substances

  • DNA Primers
  • Fungal Proteins
  • Protozoan Proteins
  • Transcription Factors