Design of an optical switch for studying conformational dynamics in individual molecules of GroEL

Bioconjug Chem. 2008 Jul;19(7):1339-41. doi: 10.1021/bc800118j. Epub 2008 Jun 24.

Abstract

We describe the design of an optical switch in the chaperonin GroEL that is opened and closed by its ATP- and cochaperonin GroES-driven conformational changes. The switch, based on a fluorophore and a quencher, is engineered into the single-ring variant of the chaperone, and shows dramatic modulation of its fluorescent intensity in response to the transition of the protein between its allosteric states. It, therefore, forms a sensitive probe for the dynamics of the allosteric transitions of this machine, both in the bulk and in single molecules.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Proteins / chemistry*
  • Bacterial Proteins / metabolism*
  • Chaperonin 60 / chemistry*
  • Chaperonin 60 / metabolism*
  • Escherichia coli / metabolism*
  • Fluorescence
  • Fluorescent Dyes / metabolism*
  • Models, Molecular
  • Optics and Photonics*
  • Protein Conformation

Substances

  • Bacterial Proteins
  • Chaperonin 60
  • Fluorescent Dyes