Competitive oxidation of volatile fatty acids by sulfate- and nitrate-reducing bacteria from an oil field in Argentina

Appl Environ Microbiol. 2008 Jul;74(14):4324-35. doi: 10.1128/AEM.00419-08. Epub 2008 May 23.

Abstract

Acetate, propionate, and butyrate, collectively referred to as volatile fatty acids (VFA), are considered among the most important electron donors for sulfate-reducing bacteria (SRB) and heterotrophic nitrate-reducing bacteria (hNRB) in oil fields. Samples obtained from a field in the Neuquén Basin, western Argentina, had significant activity of mesophilic SRB, hNRB, and nitrate-reducing, sulfide-oxidizing bacteria (NR-SOB). In microcosms, containing VFA (3 mM each) and excess sulfate, SRB first used propionate and butyrate for the production of acetate, which reached concentrations of up to 12 mM prior to being used as an electron donor for sulfate reduction. In contrast, hNRB used all three organic acids with similar kinetics, while reducing nitrate to nitrite and nitrogen. Transient inhibition of VFA-utilizing SRB was observed with 0.5 mM nitrite and permanent inhibition with concentrations of 1 mM or more. The addition of nitrate to medium flowing into an upflow, packed-bed bioreactor with an established VFA-oxidizing SRB consortium led to a spike of nitrite up to 3 mM. The nitrite-mediated inhibition of SRB led, in turn, to the transient accumulation of up to 13 mM of acetate. The complete utilization of nitrate and the incomplete utilization of VFA, especially propionate, and sulfate indicated that SRB remained partially inhibited. Hence, in addition to lower sulfide concentrations, an increase in the concentration of acetate in the presence of sulfate in waters produced from an oil field subjected to nitrate injection may indicate whether the treatment is successful. The microbial community composition in the bioreactor, as determined by culturing and culture-independent techniques, indicated shifts with an increasing fraction of nitrate. With VFA and sulfate, the SRB genera Desulfobotulus, Desulfotignum, and Desulfobacter as well as the sulfur-reducing Desulfuromonas and the NR-SOB Arcobacter were detected. With VFA and nitrate, Pseudomonas spp. were present. hNRB/NR-SOB from the genus Sulfurospirillum were found under all conditions.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Argentina
  • Base Sequence
  • Bioreactors
  • Culture Media
  • DNA, Bacterial / isolation & purification
  • Electrophoresis, Gel, Pulsed-Field
  • Fatty Acids, Volatile / metabolism*
  • Molecular Sequence Data
  • Nitrates / metabolism*
  • Nitrites / metabolism
  • Oxidation-Reduction
  • Petroleum / microbiology*
  • Phylogeny
  • Polymerase Chain Reaction
  • RNA, Ribosomal, 16S / analysis
  • Sequence Analysis, DNA
  • Sulfates / metabolism*
  • Sulfides / metabolism
  • Sulfur-Reducing Bacteria / isolation & purification
  • Sulfur-Reducing Bacteria / metabolism*

Substances

  • Culture Media
  • DNA, Bacterial
  • Fatty Acids, Volatile
  • Nitrates
  • Nitrites
  • Petroleum
  • RNA, Ribosomal, 16S
  • Sulfates
  • Sulfides

Associated data

  • GENBANK/EU628133
  • GENBANK/EU628134
  • GENBANK/EU628135
  • GENBANK/EU628136
  • GENBANK/EU628137
  • GENBANK/EU628138
  • GENBANK/EU628139
  • GENBANK/EU628140
  • GENBANK/EU628141
  • GENBANK/EU628142
  • GENBANK/EU628143
  • GENBANK/EU628144
  • GENBANK/EU628145
  • GENBANK/EU628146
  • GENBANK/EU628147
  • GENBANK/EU628148
  • GENBANK/EU628149
  • GENBANK/EU628150
  • GENBANK/EU628151
  • GENBANK/EU628152
  • GENBANK/EU628153
  • GENBANK/EU628154
  • GENBANK/EU628155
  • GENBANK/EU628156
  • GENBANK/EU628157
  • GENBANK/EU628158