Lys631 residue in the active site of the bacteriophage T7 RNA polymerase. Affinity labeling and site-directed mutagenesis

Eur J Biochem. 1991 Feb 14;195(3):841-7. doi: 10.1111/j.1432-1033.1991.tb15773.x.

Abstract

A highly selective affinity labeling of T7 RNA polymerase with the o-formylphenyl ester of GMP and [alpha-32P]UTP was carried out. The site of the labeling was located using limited cleavages with hydroxylamine, bromine, N-chlorosuccinimide and cyanogene bromide and was identified as the Lys631 residue. Site-directed mutagenesis using synthetic oligonucleotides was used to substitute Lys631 by a Gly, Leu or Arg residue. Kinetic studies of the purified mutant enzymes showed alterations of their polymerizing activity. For the Lys----Gly mutant enzyme, anomalous template binding was observed.

Publication types

  • Comparative Study

MeSH terms

  • Affinity Labels / metabolism
  • Amino Acid Sequence
  • Base Sequence
  • Binding Sites
  • DNA-Directed RNA Polymerases / genetics
  • DNA-Directed RNA Polymerases / metabolism*
  • Escherichia coli / enzymology*
  • Guanosine Monophosphate / analogs & derivatives*
  • Guanosine Monophosphate / metabolism
  • Hydroxylamine
  • Hydroxylamines / pharmacology
  • Kinetics
  • Lysine*
  • Molecular Sequence Data
  • Mutagenesis, Site-Directed*
  • Oligonucleotide Probes
  • Plasmids
  • Restriction Mapping
  • Sequence Homology, Nucleic Acid
  • T-Phages / enzymology*
  • T-Phages / genetics

Substances

  • Affinity Labels
  • Hydroxylamines
  • Oligonucleotide Probes
  • 2-formylphenyl guanosine monophosphate ester
  • Hydroxylamine
  • Guanosine Monophosphate
  • DNA-Directed RNA Polymerases
  • Lysine