The HIV-1 transcriptional activator Tat has potent nucleic acid chaperoning activities in vitro

Nucleic Acids Res. 2008 Jun;36(10):3389-400. doi: 10.1093/nar/gkn177. Epub 2008 Apr 28.

Abstract

The human immunodeficiency virus type 1 (HIV-1) is a primate lentivirus that causes the acquired immunodeficiency syndrome (AIDS). In addition to the virion structural proteins and enzyme precursors, that are Gag, Env and Pol, HIV-1 encodes several regulatory proteins, notably a small nuclear transcriptional activator named Tat. The Tat protein is absolutely required for virus replication since it controls proviral DNA transcription to generate the full-length viral mRNA. Tat can also regulate mRNA capping and splicing and was recently found to interfere with the cellular mi- and siRNA machinery. Because of its extensive interplay with nucleic acids, and its basic and disordered nature we speculated that Tat had nucleic acid-chaperoning properties. This prompted us to examine in vitro the nucleic acid-chaperoning activities of Tat and Tat peptides made by chemical synthesis. Here we report that Tat has potent nucleic acid-chaperoning activities according to the standard DNA annealing, DNA and RNA strand exchange, RNA ribozyme cleavage and trans-splicing assays. The active Tat(44-61) peptide identified here corresponds to the smallest known sequence with DNA/RNA chaperoning properties.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • DNA, Viral / metabolism*
  • HIV Long Terminal Repeat
  • HIV-1 / genetics*
  • Molecular Chaperones / chemistry
  • Molecular Chaperones / metabolism*
  • Molecular Sequence Data
  • Nucleic Acid Hybridization
  • Peptides / chemistry
  • Peptides / metabolism
  • RNA / metabolism*
  • RNA, Catalytic
  • Trans-Splicing
  • tat Gene Products, Human Immunodeficiency Virus / chemistry
  • tat Gene Products, Human Immunodeficiency Virus / metabolism*

Substances

  • DNA, Viral
  • Molecular Chaperones
  • Peptides
  • RNA, Catalytic
  • hammerhead ribozyme
  • tat Gene Products, Human Immunodeficiency Virus
  • RNA