Assembly and channel opening in a bacterial drug efflux machine

Mol Cell. 2008 Apr 11;30(1):114-21. doi: 10.1016/j.molcel.2008.02.015.

Abstract

Drugs and certain proteins are transported across the membranes of Gram-negative bacteria by energy-activated pumps. The outer membrane component of these pumps is a channel that opens from a sealed resting state during the transport process. We describe two crystal structures of the Escherichia coli outer membrane protein TolC in its partially open state. Opening is accompanied by the exposure of three shallow intraprotomer grooves in the TolC trimer, where our mutagenesis data identify a contact point with the periplasmic component of a drug efflux pump, AcrA. We suggest that the assembly of multidrug efflux pumps is accompanied by induced fit of TolC driven mainly by accommodation of the periplasmic component.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Outer Membrane Proteins / chemistry*
  • Bacterial Outer Membrane Proteins / genetics
  • Bacterial Outer Membrane Proteins / metabolism*
  • Biological Transport / physiology
  • Crystallography, X-Ray
  • Drug Resistance, Microbial / physiology*
  • Escherichia coli Proteins / chemistry*
  • Escherichia coli Proteins / genetics
  • Escherichia coli Proteins / metabolism*
  • Lipoproteins
  • Membrane Transport Proteins / chemistry*
  • Membrane Transport Proteins / genetics
  • Membrane Transport Proteins / metabolism*
  • Models, Molecular
  • Molecular Sequence Data
  • Multidrug Resistance-Associated Proteins / chemistry*
  • Multidrug Resistance-Associated Proteins / genetics
  • Multidrug Resistance-Associated Proteins / metabolism*
  • Point Mutation
  • Protein Conformation*

Substances

  • AcrA protein, E coli
  • AcrB protein, E coli
  • Bacterial Outer Membrane Proteins
  • Escherichia coli Proteins
  • Lipoproteins
  • Membrane Transport Proteins
  • Multidrug Resistance-Associated Proteins
  • tolC protein, E coli

Associated data

  • PDB/2VDD
  • PDB/2VDE