FT-COMAR: fault tolerant three-dimensional structure reconstruction from protein contact maps

Bioinformatics. 2008 May 15;24(10):1313-5. doi: 10.1093/bioinformatics/btn115. Epub 2008 Apr 1.

Abstract

Fault Tolerant Contact Map Reconstruction (FT-COMAR) is a heuristic algorithm for the reconstruction of the protein three-dimensional structure from (possibly) incomplete (i.e. containing unknown entries) and noisy contact maps. FT-COMAR runs within minutes, allowing its application to a large-scale number of predictions.

Availability: http://bioinformatics.cs.unibo.it/FT-COMAR

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Algorithms*
  • Binding Sites
  • Computer Simulation
  • Models, Chemical*
  • Models, Molecular*
  • Protein Binding
  • Protein Conformation
  • Protein Interaction Mapping / methods*
  • Proteins / chemistry*
  • Proteins / ultrastructure*
  • Reproducibility of Results
  • Sensitivity and Specificity
  • Software*

Substances

  • Proteins