Acidovorax caeni sp. nov., a denitrifying species with genetically diverse isolates from activated sludge

Int J Syst Evol Microbiol. 2008 Jan;58(Pt 1):73-7. doi: 10.1099/ijs.0.65387-0.

Abstract

Four Gram-negative, rod-shaped, non-spore-forming, denitrifying isolates were obtained from the activated sludge of an aerobic-anaerobic wastewater treatment plant in Belgium. Analysis of repetitive sequence-based PCR showed that the four isolates were genetically different from each other. Results of 16S rRNA gene sequence analysis and DNA-DNA hybridization experiments indicated that these four isolates were affiliated to the genus Acidovorax and could be differentiated from all recognized species of the genus. Analysis of whole-cell proteins and results of physiological and biochemical tests allowed differentiation of the new isolates from their closest phylogenetic neighbours. These new isolates therefore represent a novel species of the genus Acidovorax, for which the name Acidovorax caeni sp. nov. is proposed. The type strain is R-24608(T) (=LMG 24103(T) =DSM 19327(T)).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Proteins / analysis
  • Bacterial Typing Techniques
  • Belgium
  • Comamonadaceae / classification*
  • Comamonadaceae / genetics*
  • Comamonadaceae / isolation & purification
  • Comamonadaceae / physiology
  • DNA, Bacterial / analysis
  • Genes, rRNA
  • Genetic Variation*
  • Molecular Sequence Data
  • Nitrates / metabolism*
  • Nucleic Acid Hybridization
  • Phenotype
  • Phylogeny
  • Polymerase Chain Reaction
  • RNA, Ribosomal, 16S / genetics
  • Repetitive Sequences, Nucleic Acid / genetics
  • Sequence Analysis, DNA
  • Sewage / microbiology*
  • Species Specificity
  • Waste Disposal, Fluid / methods

Substances

  • Bacterial Proteins
  • DNA, Bacterial
  • Nitrates
  • RNA, Ribosomal, 16S
  • Sewage

Associated data

  • GENBANK/AM084006