Fast protein fold estimation from NMR-derived distance restraints

Annamária F Angyán; András Perczel; Sándor Pongor; Zoltán Gáspári

doi:10.1093/bioinformatics/btm564

Fast protein fold estimation from NMR-derived distance restraints

Bioinformatics. 2008 Jan 15;24(2):272-5. doi: 10.1093/bioinformatics/btm564. Epub 2007 Nov 13.

Authors

Annamária F Angyán¹, András Perczel, Sándor Pongor, Zoltán Gáspári

Affiliation

¹ Institute of Chemistry, Eötvös Loránd University, Budapest, Hungary.

PMID: 18003647
DOI: 10.1093/bioinformatics/btm564

Abstract

PRIDE-NMR is a fast novel method to relate known protein folds to NMR distance restraints. It can be used to obtain a first guess about a structure being determined, as well as to estimate the completeness or verify the correctness of NOE data.

Availability: The PRIDE-NMR server is available at http://www.icgeb.org/pride

Publication types

Research Support, Non-U.S. Gov't

MeSH terms

Algorithms
Amino Acid Sequence
Computer Simulation
Magnetic Resonance Spectroscopy / methods*
Models, Chemical*
Models, Molecular*
Molecular Sequence Data
Protein Conformation
Protein Folding*
Proteins / chemistry*
Proteins / ultrastructure*
Sequence Analysis, Protein / methods*

Substances

Proteins