Evidence for fast conformational change upon ligand dissociation in the HemAT class of bacterial oxygen sensors

FEBS Lett. 2007 Sep 18;581(23):4512-8. doi: 10.1016/j.febslet.2007.08.031. Epub 2007 Aug 24.

Abstract

Here we report the results of transient absorption and photoacoustic calorimetry studies of CO photodissociation from the heme domain of the bacterial oxygen sensor HemAT-Bs. The results indicate that CO photolysis is accompanied by an overall DeltaH of -19 kcal mol(-1) and DeltaV of +4 ml mol(-1) as well as a red-shifted kinetic difference spectrum all occurring in <50 ns. Analysis of the DeltaH/DeltaV reveals that a conformational change takes place with a DeltaH(conf) of -40 kcal mol(-1) and DeltaV(conf) of -22 ml mol(-1). These thermodynamic changes are consistent with an increase in the solvent accessible surface area of the protein upon ligand dissociation, as observed in the X-ray structure of the ferric CN-bound and CN free forms of HemAT-Bs.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Bacterial Proteins / chemistry*
  • Bacterial Proteins / metabolism
  • Calorimetry
  • Carbon Monoxide / chemistry
  • Carbon Monoxide / metabolism
  • Heme / chemistry
  • Heme / metabolism
  • Hemeproteins / chemistry*
  • Hemeproteins / metabolism
  • Ligands
  • Models, Molecular
  • Oxygen / chemistry*
  • Oxygen / metabolism
  • Protein Binding
  • Protein Conformation
  • Thermodynamics

Substances

  • Bacterial Proteins
  • Hemeproteins
  • Ligands
  • Heme
  • Carbon Monoxide
  • Oxygen