Microarray for genes associated with signal transduction in diabetic OLETF keratocytes

Korean J Ophthalmol. 2007 Jun;21(2):111-9. doi: 10.3341/kjo.2007.21.2.111.

Abstract

Purpose: The purpose of this study was to identify differences in signal transduction gene expression between normal and diabetic keratocytes stimulated with interleukin-1alpha (IL-1alpha) and tumor necrosis factor-alpha (TNF-alpha).

Methods: Normal and diabetic keratocytes were primarily cultured and treated with 20 ng/ml IL-1alpha and TNF-alpha for 6 h. cDNA was hybridized to an oligonucleotide microarray. Genes identified by the microarray were further evaluated by real-time PCR.

Results: Diabetic keratocytes over-expressed components of the MAPK and Notch pathways, and under-expressed components of the insulin, calcium, and TGF-beta pathways. Cytokine treated diabetic keratocytes differentially expressed components of the TGF-beta and MAPK pathways. After IL-1alpha and TNF-alpha treatment, nine genes were under-expressed, falling in the insulin, TGF-beta, and Toll-like receptor pathways. Real-time PCR showed a significant decrease in the IL-6 and TGF-beta2 genes and a significant increase in the Ppm1a gene.

Conclusions: There were some differences in gene expression between normal and diabetic keratocytes related to signal transduction pathways, such as the insulin, MAPK, calcium, and TGF-beta pathways. In addition, IL-1alpha and TNF-alpha stimulating the insulin, TGF-beta, and Toll-like receptor signaling pathways may have different effects in diabetic keratocytes.

MeSH terms

  • Animals
  • Apoptosis
  • Cells, Cultured
  • Cornea / drug effects
  • Cornea / metabolism*
  • Cornea / pathology
  • DNA / genetics*
  • Diabetes Mellitus, Experimental / genetics*
  • Diabetes Mellitus, Experimental / pathology
  • Gene Expression Profiling
  • Insulin / genetics
  • Interleukin-1alpha / pharmacology
  • Mitogen-Activated Protein Kinase Kinases / genetics
  • Nuclear Proteins / genetics
  • Oligonucleotide Array Sequence Analysis / methods*
  • Phosphoric Monoester Hydrolases / genetics
  • Polymerase Chain Reaction
  • Prolactin / genetics
  • Rats
  • Rats, Long-Evans
  • Receptors, Notch / genetics
  • Signal Transduction / drug effects
  • Signal Transduction / genetics*
  • Transforming Growth Factor beta / genetics
  • Tumor Necrosis Factor-alpha / pharmacology
  • Ubiquitin-Protein Ligases / genetics

Substances

  • Insulin
  • Interleukin-1alpha
  • Nuclear Proteins
  • Receptors, Notch
  • Transforming Growth Factor beta
  • Tumor Necrosis Factor-alpha
  • Prolactin
  • DNA
  • Ubiquitin-Protein Ligases
  • seven in absentia proteins
  • Mitogen-Activated Protein Kinase Kinases
  • Phosphoric Monoester Hydrolases
  • myo-inositol-1 (or 4)-monophosphatase